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1. BitLib BitLib Public

   Provides a bit-vector, an optimized replacement of the infamous std::vector<:b:ool>. In addition to the bit-vector, the library also provides implementations of STL algorithms tailored for bit-vect…

   C++ 76 5

2. marbl/MashMap marbl/MashMap Public

   A fast approximate aligner for long DNA sequences

   C++ 289 38

3. marbl/parsnp marbl/parsnp Public

   Parsnp was designed to align the core genome of hundreds to thousands of bacterial genomes within a few minutes to few hours. Input can be both draft assemblies and finished genomes, and output inc…

   C++ 157 28

4. pangenome/impg pangenome/impg Public

   implicit pangenome graph

   Rust 109 15