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16 followers · 15 following
  • Uppsala University, SciLifeLab Genomics, NGI Uppsala
  • Uppsala, Sweden

Achievements

Achievement: YOLOAchievement: Pair Extraordinairex3Achievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

Achievements

Achievement: YOLOAchievement: Pair Extraordinairex3Achievement: Pull Sharkx3Achievement: Arctic Code Vault Contributor

Organizations

@SciLifeLab @UNF-PIPE @NationalGenomicsInfrastructure @arteria-project

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matrulda/README.md

Character name: Matrulda

  • Class: Bioinformatician: lvl 5, System developer: lvl 5
  • Background: Suburban adventurer
  • Player name: Matilda
  • Race: Human
  • Alignment: Neutral good
  • Languages: Common, Python, R, Nextflow, Perl

Pinned Loading

  1. Molmed/checkQC Molmed/checkQC Public

    CheckQC inspects the content of an Illumina runfolder and determines if it passes a set of quality criteria

    Python 29 17

  2. arteria-project/arteria-runfolder arteria-project/arteria-runfolder Public

    A webservice used to monitor runfolders from Illumina instruments and check what state they are in (e.g. ready to process or not).

    Python 5 14

  3. arteria-project/arteria-bcl2fastq arteria-project/arteria-bcl2fastq Public

    Provides a simple http-interface for Illumina bcl2fastq

    Python 3 9

  4. Molmed/seqreports Molmed/seqreports Public

    This is a Nextflow pipeline for generating sequencing reports for the SNP&Seq Technology platform, NGI Uppsala, SciLifelab Genomics.

    Python 2 11

  5. gimme-food gimme-food Public

    Make a shopping list from your favorite recipes

    Python 7 1