./biology/bcftools, Tools for manipulating BCF and VCF variant call files

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Branch: CURRENT, Version: 1.21, Package name: bcftools-1.21, Maintainer: bacon

BCFtools is a set of utilities that manipulate variant calls in the
Variant Call Format (VCF) and its binary counterpart BCF. All
commands work transparently with both VCFs and BCFs, both
uncompressed and BGZF-compressed.


Required to run:
[biology/htslib] [lang/python37]

Required to build:
[pkgtools/cwrappers]

Master sites:

Filesize: 7795.091 KB

Version history: (Expand)

CVS history: (Expand)


   2025-03-06 02:19:07 by Jason Bacon | Files touched by this commit (44) 
Log message:
Multiple packages: OWNER -> MAINTAINER
   2024-10-12 00:41:14 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/bcftools: Update to 1.21

Numerous bug fixes and enhancements since 1.17
Changes:        https://github.com/samtools/bcftools/releases

Reported by:    portscout
   2023-08-14 07:25:36 by Thomas Klausner | Files touched by this commit (1247) 
Log message:
*: recursive bump for Python 3.11 as new default
   2023-02-25 14:56:33 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/bcftools: Update to 1.17

Numerous enhancements and bug fixes

Changes: https://github.com/samtools/bcftools/releases
   2022-12-28 16:27:18 by Jason Bacon | Files touched by this commit (20) 
Log message:
Change MAINTAINER= to OWNER= on mission-critical packages
   2022-06-30 13:19:02 by Nia Alarie | Files touched by this commit (524) 
Log message:
*: Revbump packages that use Python at runtime without a PKGNAME prefix
   2022-06-28 13:38:00 by Thomas Klausner | Files touched by this commit (3952) 
Log message:
*: recursive bump for perl 5.36
   2022-02-27 00:14:33 by Jason Bacon | Files touched by this commit (4) 
Log message:
biology/bcftools: Update to 1.15

Several minor enhancements and bug fixes
Changes: https://github.com/samtools/bcftools/tags