./biology/cdhit, Clustering and comparing protein or nucleotide sequences

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Branch: CURRENT, Version: 4.8.1nb1, Package name: cdhit-4.8.1nb1, Maintainer: bacon

CD-HIT is a very widely used program for clustering and comparing protein or
nucleotide sequences.


Required to run:
[shells/bash]

Required to build:
[pkgtools/cwrappers]

Master sites:

Filesize: 923.476 KB

Version history: (Expand)

CVS history: (Expand)


   2025-11-27 09:58:23 by Thomas Klausner | Files touched by this commit (1) 
Log message:
cdhit: switch HOMEPAGE to github, old one is gone
   2022-06-28 13:38:00 by Thomas Klausner | Files touched by this commit (3952) 
Log message:
*: recursive bump for perl 5.36
   2021-12-17 18:57:55 by Jason Bacon | Files touched by this commit (3) 
Log message:
biology/cdhit: Update to 4.8.1

Add support for gzipped input

Changes: https://github.com/weizhongli/cdhit/releases
   2021-10-26 12:03:45 by Nia Alarie | Files touched by this commit (73) 
Log message:
biology: Replace RMD160 checksums with BLAKE2s checksums

All checksums have been double-checked against existing RMD160 and
SHA512 hashes
   2021-10-07 15:19:44 by Nia Alarie | Files touched by this commit (73) 
Log message:
biology: Remove SHA1 hashes for distfiles
   2021-05-24 21:56:06 by Thomas Klausner | Files touched by this commit (3575) 
Log message:
*: recursive bump for perl 5.34
   2020-08-31 20:13:29 by Thomas Klausner | Files touched by this commit (3631) 
Log message:
*: bump PKGREVISION for perl-5.32.
   2019-08-11 15:25:21 by Thomas Klausner | Files touched by this commit (3557) 
Log message:
Bump PKGREVISIONs for perl 5.30.0